# Paths to local installs of SAMtools and BEDtools

PATTERNCNV=/projects/bsi/bioinf_int/s112423.PatternCNV/trunk
SAMTOOLS=/projects/bsi/bictools/apps/alignment/samtools/samtools-0.1.18/samtools
BEDTOOLS=/projects/bsi/bictools/apps/misc/BEDTools/2.15.0/bin

