##FastQC	0.7.0
>>Basic Statistics	pass
#Measure	Value	
Filename	TestSample_2_1M.fastq	
File type	Conventional base calls	
Total Sequences	250000	
Sequence length	50	
%GC	54	
>>END_MODULE
>>Per base sequence quality	pass
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	36.894088	39.0	37.0	39.0	33.0	39.0
2	36.145348	39.0	36.0	39.0	30.0	39.0
3	35.995808	38.0	36.0	39.0	30.0	39.0
4	35.893032	38.0	35.0	39.0	30.0	39.0
5	35.881684	38.0	35.0	39.0	30.0	39.0
6	36.160372	39.0	36.0	39.0	30.0	39.0
7	36.336144	39.0	36.0	39.0	31.0	39.0
8	36.158284	39.0	36.0	39.0	31.0	39.0
9	36.172948	39.0	36.0	39.0	31.0	39.0
10	35.944464	38.0	35.0	39.0	30.0	39.0
11	36.06802	39.0	36.0	39.0	30.0	39.0
12	36.096792	39.0	36.0	39.0	30.0	39.0
13	36.01516	38.0	36.0	39.0	30.0	39.0
14	35.953892	38.0	36.0	39.0	30.0	39.0
15	35.921984	38.0	35.0	39.0	30.0	39.0
16	36.022352	39.0	36.0	39.0	30.0	39.0
17	35.932104	38.0	36.0	39.0	30.0	39.0
18	35.877056	38.0	35.0	39.0	30.0	39.0
19	35.841092	38.0	35.0	39.0	30.0	39.0
20	35.793168	38.0	35.0	39.0	30.0	39.0
21	35.885788	39.0	36.0	39.0	30.0	39.0
22	35.781616	38.0	35.0	39.0	30.0	39.0
23	35.65492	38.0	35.0	39.0	29.0	39.0
24	35.609596	38.0	35.0	39.0	29.0	39.0
25	35.548228	38.0	35.0	39.0	29.0	39.0
26	35.574668	38.0	35.0	39.0	29.0	39.0
27	35.501732	38.0	35.0	39.0	29.0	39.0
28	35.377948	38.0	35.0	39.0	28.0	39.0
29	35.319292	38.0	35.0	39.0	28.0	39.0
30	35.239124	38.0	35.0	39.0	28.0	39.0
31	35.289512	38.0	35.0	39.0	28.0	39.0
32	35.156348	38.0	35.0	39.0	28.0	39.0
33	35.027756	38.0	35.0	39.0	28.0	39.0
34	34.901132	38.0	35.0	39.0	28.0	39.0
35	34.76052	38.0	34.0	39.0	27.0	39.0
36	34.846808	38.0	35.0	39.0	27.0	39.0
37	34.639428	38.0	34.0	39.0	27.0	39.0
38	34.50968	38.0	34.0	39.0	26.0	39.0
39	34.373048	38.0	34.0	39.0	26.0	39.0
40	34.207912	38.0	34.0	39.0	25.0	39.0
41	34.326412	38.0	34.0	39.0	26.0	39.0
42	34.093448	38.0	33.0	39.0	25.0	39.0
43	33.953228	38.0	33.0	39.0	24.0	39.0
44	33.796128	37.0	33.0	39.0	23.0	39.0
45	33.547932	37.0	33.0	39.0	23.0	39.0
46	33.527112	37.0	33.0	39.0	23.0	39.0
47	33.31828	37.0	33.0	39.0	22.0	39.0
48	33.09108	37.0	33.0	39.0	21.0	39.0
49	32.841716	37.0	32.0	39.0	19.0	39.0
50	32.51928	37.0	32.0	39.0	17.0	39.0
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
2	1277.0
3	68.0
4	86.0
5	109.0
6	165.0
7	211.0
8	234.0
9	212.0
10	244.0
11	302.0
12	321.0
13	320.0
14	386.0
15	453.0
16	435.0
17	489.0
18	543.0
19	636.0
20	800.0
21	929.0
22	1157.0
23	1324.0
24	1520.0
25	1863.0
26	2275.0
27	2693.0
28	3188.0
29	4004.0
30	4929.0
31	6305.0
32	8106.0
33	10636.0
34	14464.0
35	20306.0
36	31439.0
37	51367.0
38	74910.0
39	1294.0
>>END_MODULE
>>Per base sequence content	fail
#Base	G	A	T	C
1	81273	24384	36855	107475
2	71910	45933	72734	59413
3	76547	53973	55034	64433
4	78391	69305	42940	59335
5	77163	72406	47540	52873
6	62380	79447	45148	62990
7	56080	37738	91561	64598
8	61349	49657	59979	78981
9	59788	47435	68052	74702
10	65812	79516	50755	53902
11	77672	52335	43710	76272
12	66111	47148	62626	74105
13	63107	55566	65536	65775
14	64582	56265	63546	65591
15	66271	57240	59205	67266
16	67399	56393	58833	67364
17	67002	58788	58268	65929
18	67519	56586	58518	67357
19	68048	56863	57559	67513
20	67124	55955	58697	68214
21	66328	57192	58412	68055
22	66056	58071	59495	66360
23	69218	57333	56276	67161
24	66119	60163	59006	64692
25	69063	57710	55950	67262
26	68360	58464	57019	66142
27	66786	58677	57101	67414
28	66890	57466	56675	68957
29	67810	57168	57190	67817
30	66894	57784	58593	66715
31	67243	56810	58952	66983
32	68307	58447	56774	66457
33	65798	58501	59778	65910
34	67638	56388	57869	68092
35	67841	56386	58362	67398
36	66286	57985	58661	67057
37	67600	57724	56605	68052
38	68031	57395	57355	67193
39	67011	58016	58824	66128
40	67590	55737	58611	68040
41	66760	58500	57231	67479
42	65883	56998	57968	69133
43	66384	57131	57900	68564
44	67811	57781	56879	67511
45	65846	57537	57826	68767
46	67194	56823	56783	69169
47	67016	58257	57078	67617
48	65861	57991	58186	67895
49	67376	56979	56371	69228
50	66814	58425	56606	68077
>>END_MODULE
>>Per base GC content	fail
#Base	%GC
1	75.50312616256045
2	52.53130125205008
3	56.39493253649189
4	55.096791227782425
5	52.01814530646206
6	50.15502170303843
7	48.27564135900503
8	56.13963499035869
9	53.80094968737124
10	47.8884733083985
11	61.580309533619484
12	56.08864354574183
13	51.55609959037378
14	52.0725326420891
15	53.41864614252226
16	53.90757193316505
17	53.175165108585645
18	53.954716377310184
19	54.228087509950676
20	54.137365494619786
21	53.75599531175621
22	52.97021385539759
23	54.554218602492924
24	52.328586286902954
25	54.533271996319776
26	53.8040282416945
27	53.68472425573451
28	54.341408387602606
29	54.2540552433146
30	53.44659300920852
31	53.69297726290861
32	53.9088345300718
33	52.68593966886278
34	54.2948233308132
35	54.09841311748211
36	53.33954694006536
37	54.26492413423421
38	54.09522590349396
39	53.260073846203085
40	54.25677459616446
41	53.70204424530943
42	54.010288740789335
43	53.98373463370923
44	54.13269755422391
45	53.85036963548501
46	54.551964443591004
47	53.86009409204379
48	53.516742486986516
49	54.65165590468646
50	53.97323965077104
>>END_MODULE
>>Per sequence GC content	warn
#GC Content	Count
0	6.0
1	4.5
2	3.0
3	4.0
4	5.0
5	2.5
6	0.0
7	1.0
8	2.0
9	3.0
10	4.0
11	9.0
12	14.0
13	21.0
14	28.0
15	47.0
16	66.0
17	93.5
18	121.0
19	194.5
20	268.0
21	392.5
22	517.0
23	625.5
24	734.0
25	899.0
26	1064.0
27	1414.0
28	1764.0
29	1995.0
30	2226.0
31	2496.0
32	2766.0
33	3221.5
34	3677.0
35	4205.5
36	4734.0
37	5316.5
38	5899.0
39	6454.5
40	7010.0
41	7727.5
42	8445.0
43	9354.0
44	10263.0
45	11093.5
46	11924.0
47	12808.0
48	13692.0
49	14332.0
50	14972.0
51	15572.5
52	16173.0
53	16805.5
54	17438.0
55	18421.0
56	19404.0
57	19058.0
58	18712.0
59	18925.5
60	19139.0
61	17893.5
62	16648.0
63	15523.5
64	14399.0
65	13217.0
66	12035.0
67	10475.0
68	8915.0
69	7323.0
70	5731.0
71	4754.5
72	3778.0
73	3171.5
74	2565.0
75	2130.5
76	1696.0
77	1414.5
78	1133.0
79	914.5
80	696.0
81	599.0
82	502.0
83	415.0
84	328.0
85	281.0
86	234.0
87	173.5
88	113.0
89	87.5
90	62.0
91	55.0
92	48.0
93	37.0
94	26.0
95	21.0
96	16.0
97	9.5
98	3.0
99	2.5
100	2.0
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	0.0052
2	0.0040
3	0.0052
4	0.0116
5	0.0072
6	0.013999999999999999
7	0.0092
8	0.0136
9	0.0092
10	0.0060
11	0.0044
12	0.0040
13	0.0063999999999999994
14	0.0063999999999999994
15	0.0072
16	0.0044
17	0.0052
18	0.0080
19	0.0068
20	0.0040
21	0.0052
22	0.0072
23	0.0048000000000000004
24	0.0080
25	0.0060
26	0.0060
27	0.0088
28	0.0048000000000000004
29	0.0060
30	0.0056
31	0.0048000000000000004
32	0.0060
33	0.0052
34	0.0052
35	0.0052
36	0.0044
37	0.007600000000000001
38	0.0104
39	0.0084
40	0.0088
41	0.012
42	0.0072
43	0.0084
44	0.0072
45	0.009600000000000001
46	0.012400000000000001
47	0.012799999999999999
48	0.0268
49	0.0184
50	0.0312
>>END_MODULE
>>Sequence Length Distribution	pass
#Length	Count
50	250000.0
>>END_MODULE
>>Sequence Duplication Levels	warn
#Total Duplicate Percentage	39.349
#Duplication Level	Relative count
1	100.0
2	10.663468038449489
3	3.2670524805856456
4	1.5440800646320754
5	0.8334569916406984
6	0.5366770539644853
7	0.3338774298857397
8	0.30172626997081664
9	0.18054112875302963
10+	1.2522464592504658
>>END_MODULE
>>Overrepresented sequences	warn
#Sequence	Count	Percentage	Possible Source
CTGCTATCTGCCTTCCAGGCCACTGTCACGGCTCCCGGGTAGAAGTCACT	322	0.1288	No Hit
GGTTTATTGAGTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGA	277	0.11080000000000001	No Hit
CCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTG	251	0.10039999999999999	No Hit
>>END_MODULE
>>Kmer Content	warn
#Sequence	Count	Obs/Exp Overall	Obs/Exp Max	Max Obs/Exp Position
AAAAA	22330	3.2698724	6.589597	2
AGAAG	31475	3.2595756	6.081666	41
CTTCT	30350	2.9788415	5.675558	5
CCTGG	39385	2.8140948	5.707198	1
AGCAG	31000	2.685992	5.2052436	6
CTCCA	31350	2.6499631	6.3523664	1
AAGAA	20635	2.5411084	5.7355604	2
CCAGG	34050	2.4683566	5.056375	8
CTGGA	28740	2.4544084	7.7629757	1
CTGGG	34055	2.445781	5.881998	1
CTCAG	26825	2.2791395	5.199803	1
TCCAG	26765	2.274042	6.576221	7
TCTCC	26825	2.2349052	5.267596	7
GGAAG	25035	2.1803162	5.859086	3
CTGCC	29750	2.1147835	5.7899427	8
CAGGA	24270	2.102872	5.244234	1
TGCAG	22745	1.9424329	5.0344048	7
TGGAA	18615	1.9000955	6.5914516	2
CCTTC	22120	1.8429115	5.923702	11
AAAAT	12690	1.8315582	6.105254	3
TGCCT	21295	1.7833061	5.878813	9
TCTGC	21215	1.7766067	6.7267184	7
TTTAT	11945	1.6508074	5.0996556	3
CTTTG	16400	1.6179364	5.0388355	1
ATCTG	13550	1.3562502	6.486042	6
ATCCA	12525	1.265413	5.6603165	6
AATCT	10090	1.2009227	5.838042	5
>>END_MODULE
