DATE=2/25/2014
LABINDEXES=-
EMAIL=m084061
SAMPLENAMES=SAMPLE1
TOOL=MAPRSeq
TOOL_INFO=/data2/external_data/Bockol_Matthew_m084061/maprseq/sample_output/maprseq/mrnaseq/test_sample/tool_info.txt
DELIVERY_FOLDER=/data2/external_data/Bockol_Matthew_m084061/maprseq/delivery
MEMORY_INFO=/data2/external_data/Bockol_Matthew_m084061/maprseq/sample_output/maprseq/mrnaseq/test_sample/memory_info.txt
DISEASE=TEST
ANALYSIS=all
SAMPLE_INFO=/data2/external_data/Bockol_Matthew_m084061/maprseq/sample_output/maprseq/mrnaseq/test_sample/sample_info.txt
TERTIARY_FOLDER=NA
TYPE=mrnaseq
UNIQUE_ID=0000
ANALYSIS_NAME=NA
PAIRED=1
GENOMEBUILD=hg19
INPUT_DIR=/projects/bsi/bictools/scripts/mrnaseq/MAPRSeq/test/sample_data
OUTPUT_FOLDER=test_sample
LOGS=/data2/external_data/Bockol_Matthew_m084061/maprseq/sample_output/maprseq/mrnaseq/test_sample/logs
CENTER=MAYO
PLATFORM=illumina
PI=maprseq
SAMPLEINFORMATION=MAPRSeq sample run
BASE_OUTPUT_DIR=/data2/external_data/Bockol_Matthew_m084061/maprseq/sample_output
VERSION=1.2.1.4
ALIGNER=TOPHAT
LANEINDEX=-
READLENGTH=50
CHRINDEX=1:2:3:4:5:6:7:8:9:10:11:12:13:14:15:16:17:18:19:20:21:22:X:Y:M
GROUP_ID=0000
FASTQC=Yes
FOLDER_FASTQC=NA
