##FastQC	0.7.0
>>Basic Statistics	pass
#Measure	Value	
Filename	TestSample_1_1M.fastq	
File type	Conventional base calls	
Total Sequences	250000	
Sequence length	51	
%GC	53	
>>END_MODULE
>>Per base sequence quality	pass
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	37.352152	39.0	37.0	39.0	33.0	39.0
2	36.722328	39.0	37.0	39.0	32.0	39.0
3	36.64892	39.0	36.0	39.0	31.0	39.0
4	36.5457	39.0	36.0	39.0	31.0	39.0
5	36.530064	39.0	36.0	39.0	31.0	39.0
6	36.81386	39.0	37.0	39.0	32.0	39.0
7	37.018504	39.0	37.0	39.0	33.0	39.0
8	36.873532	39.0	37.0	39.0	32.0	39.0
9	36.896796	39.0	37.0	39.0	32.0	39.0
10	36.623596	39.0	36.0	39.0	31.0	39.0
11	36.818016	39.0	37.0	39.0	32.0	39.0
12	36.833424	39.0	37.0	39.0	32.0	39.0
13	36.747572	39.0	36.0	39.0	32.0	39.0
14	36.714472	39.0	36.0	39.0	32.0	39.0
15	36.659668	39.0	36.0	39.0	32.0	39.0
16	36.646808	39.0	36.0	39.0	32.0	39.0
17	36.568936	39.0	36.0	39.0	31.0	39.0
18	36.443708	39.0	36.0	39.0	31.0	39.0
19	36.434864	39.0	36.0	39.0	31.0	39.0
20	36.386616	39.0	36.0	39.0	31.0	39.0
21	36.343212	39.0	36.0	39.0	31.0	39.0
22	36.234372	39.0	36.0	39.0	31.0	39.0
23	36.144036	39.0	36.0	39.0	30.0	39.0
24	36.030044	39.0	36.0	39.0	30.0	39.0
25	35.954292	39.0	35.0	39.0	30.0	39.0
26	36.037772	39.0	36.0	39.0	30.0	39.0
27	35.921776	39.0	36.0	39.0	30.0	39.0
28	35.837648	39.0	35.0	39.0	30.0	39.0
29	35.7539	38.0	35.0	39.0	30.0	39.0
30	35.633828	38.0	35.0	39.0	29.0	39.0
31	35.628732	39.0	35.0	39.0	29.0	39.0
32	35.502192	38.0	35.0	39.0	29.0	39.0
33	35.326772	38.0	35.0	39.0	28.0	39.0
34	35.185928	38.0	35.0	39.0	28.0	39.0
35	35.058388	38.0	35.0	39.0	28.0	39.0
36	35.0451	38.0	35.0	39.0	28.0	39.0
37	34.82742	38.0	34.0	39.0	27.0	39.0
38	34.592472	38.0	34.0	39.0	26.0	39.0
39	34.516364	38.0	34.0	39.0	26.0	39.0
40	34.385392	38.0	34.0	39.0	25.0	39.0
41	34.448024	38.0	34.0	39.0	26.0	39.0
42	34.266724	38.0	34.0	39.0	25.0	39.0
43	34.096648	38.0	34.0	39.0	25.0	39.0
44	33.941228	38.0	33.0	39.0	24.0	39.0
45	33.810372	38.0	33.0	39.0	23.0	39.0
46	33.900368	38.0	34.0	39.0	24.0	39.0
47	33.625652	38.0	33.0	39.0	23.0	39.0
48	33.306824	37.0	33.0	39.0	22.0	39.0
49	33.133976	37.0	33.0	39.0	20.0	39.0
50	32.887736	37.0	33.0	39.0	19.0	39.0
51	32.333096	37.0	32.0	39.0	16.0	39.0
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
2	316.0
3	14.0
4	21.0
5	33.0
6	30.0
7	80.0
8	91.0
9	108.0
10	153.0
11	242.0
12	228.0
13	292.0
14	385.0
15	473.0
16	516.0
17	523.0
18	642.0
19	730.0
20	770.0
21	926.0
22	1109.0
23	1142.0
24	1459.0
25	1689.0
26	2109.0
27	2587.0
28	3206.0
29	3919.0
30	4893.0
31	5816.0
32	7802.0
33	9796.0
34	13347.0
35	18889.0
36	29133.0
37	49886.0
38	84690.0
39	1955.0
>>END_MODULE
>>Per base sequence content	fail
#Base	G	A	T	C
1	86206	31873	36614	95307
2	78220	54487	64490	52801
3	76183	57214	53575	63024
4	75855	72046	44361	57738
5	76669	73347	48025	51959
6	61931	80656	46380	61032
7	55530	38270	92269	63931
8	61843	50236	59984	77937
9	60093	48172	67519	74216
10	66017	80649	51026	52308
11	77912	53591	43919	74578
12	66639	47653	62184	73524
13	63108	56310	65828	64754
14	65201	57301	63311	64187
15	66916	57802	58685	66597
16	67733	57246	58740	66281
17	67923	58889	58108	65075
18	67900	58250	57675	66125
19	68611	57330	57989	66069
20	67865	56644	58055	67436
21	66813	58040	57983	67164
22	66585	58638	59251	65526
23	69462	57905	56125	66508
24	66973	61015	58369	63640
25	69679	58402	55873	65966
26	68897	59266	56552	65283
27	68319	58688	56427	66566
28	67493	57854	56748	67905
29	68240	57405	57352	67002
30	67695	58218	57633	66451
31	67507	58098	58388	66007
32	69614	58646	56638	65100
33	67063	58889	58758	65288
34	68886	56464	57272	67368
35	68746	56692	57983	66570
36	67008	58216	58250	66514
37	68340	57894	56526	67228
38	68463	57540	57123	66844
39	67264	58313	58425	65959
40	67845	56627	57653	67836
41	67832	57993	57077	67078
42	66923	57406	57617	68033
43	67462	57034	57335	68143
44	68153	57919	57716	66172
45	66358	57785	57353	68452
46	68014	56994	56998	67960
47	67721	57770	56538	67934
48	66214	58618	57849	67280
49	67807	57563	56055	68540
50	66896	58063	56959	68054
51	66628	57261	57783	68301
>>END_MODULE
>>Per base GC content	fail
#Base	%GC
1	72.6052
2	52.40881927055416
3	55.68369093905502
4	53.4372
5	51.4512
6	49.18539674158697
7	47.7844
8	55.91199999999999
9	53.723600000000005
10	47.33
11	60.995999999999995
12	56.065200000000004
13	51.144800000000004
14	51.7552
15	53.405199999999994
16	53.605599999999995
17	53.200264005280104
18	53.62072414482897
19	53.872215488861954
20	54.120400000000004
21	53.5908
22	52.8444
23	54.388000000000005
24	52.245826949923405
25	54.2753681177977
26	53.67242937943504
27	53.954
28	54.1592
29	54.097016388065555
30	53.659043908526904
31	53.4056
32	53.88603108824871
33	52.94082352658821
34	54.50378015120605
35	54.12834862055034
36	53.41136374545978
37	54.22980303054546
38	54.12929551546185
39	53.29751441224831
40	54.280867815379196
41	53.968317465397234
42	53.986934902531814
43	54.247641754742496
44	53.73859817570812
45	53.9352185254533
46	54.39699799172687
47	54.270031964730784
48	53.40593132528675
49	54.54643650111015
50	53.98604643720096
51	53.97742956239274
>>END_MODULE
>>Per sequence GC content	warn
#GC Content	Count
0	2.0
1	1.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	2.5
10	5.0
11	5.5
12	6.0
13	13.0
14	20.0
15	29.0
16	38.0
17	52.0
18	66.0
19	125.0
20	184.0
21	310.5
22	437.0
23	517.0
24	597.0
25	742.5
26	1121.5
27	1355.0
28	1656.5
29	1958.0
30	2190.5
31	2423.0
32	2805.0
33	3187.0
34	3707.0
35	4227.0
36	4911.5
37	5596.0
38	6067.0
39	6538.0
40	7279.5
41	8021.0
42	8824.0
43	9627.0
44	10368.0
45	11109.0
46	11994.0
47	12879.0
48	13645.5
49	14412.0
50	15059.0
51	15706.0
52	16375.0
53	17044.0
54	17561.5
55	18079.0
56	18764.5
57	19450.0
58	18982.0
59	18514.0
60	18504.0
61	18494.0
62	16722.5
63	14951.0
64	14394.0
65	13837.0
66	11861.5
67	9886.0
68	8615.5
69	7345.0
70	5955.0
71	4565.0
72	3864.5
73	3164.0
74	2609.5
75	1632.5
76	1210.0
77	992.0
78	774.0
79	649.5
80	525.0
81	419.5
82	314.0
83	271.5
84	229.0
85	174.5
86	120.0
87	102.5
88	85.0
89	62.5
90	40.0
91	29.0
92	18.0
93	16.5
94	15.0
95	9.5
96	4.0
97	2.5
98	1.0
99	0.5
100	0.0
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	0.0
2	7.999999999999999E-4
3	0.0015999999999999999
4	0.0
5	0.0
6	3.9999999999999996E-4
7	0.0
8	0.0
9	0.0
10	0.0
11	0.0
12	0.0
13	0.0
14	0.0
15	0.0
16	0.0
17	0.0020
18	0.02
19	3.9999999999999996E-4
20	0.0
21	0.0
22	0.0
23	0.0
24	0.0012000000000000001
25	0.032
26	7.999999999999999E-4
27	0.0
28	0.0
29	3.9999999999999996E-4
30	0.0012000000000000001
31	0.0
32	7.999999999999999E-4
33	7.999999999999999E-4
34	0.0040
35	0.0036
36	0.0048000000000000004
37	0.0048000000000000004
38	0.012
39	0.0156
40	0.0156
41	0.0080
42	0.0084
43	0.0104
44	0.016
45	0.0208
46	0.0136
47	0.014799999999999999
48	0.0156
49	0.013999999999999999
50	0.0112
51	0.010799999999999999
>>END_MODULE
>>Sequence Length Distribution	pass
#Length	Count
51	250000.0
>>END_MODULE
>>Sequence Duplication Levels	warn
#Total Duplicate Percentage	39.821
#Duplication Level	Relative count
1	100.0
2	10.992206583691985
3	3.3657920537064423
4	1.4930457468552152
5	0.8690739294438259
6	0.5167915718107645
7	0.3680685953571844
8	0.26836604131009156
9	0.22266903737184068
10+	1.2778544010369066
>>END_MODULE
>>Overrepresented sequences	warn
#Sequence	Count	Percentage	Possible Source
GGTTTATTGAGTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGAG	348	0.1392	No Hit
>>END_MODULE
>>Kmer Content	warn
#Sequence	Count	Obs/Exp Overall	Obs/Exp Max	Max Obs/Exp Position
AGAAG	33910	3.2366197	6.344444	3
CTTCT	29770	3.0026276	5.5675707	12
CTCCA	32010	2.7747195	6.0011115	6
AAAAA	20545	2.7685428	8.39936	2
CAGCT	31870	2.6950667	5.5626955	3
AAGAA	21970	2.4916358	7.2515545	2
TGGAG	29140	2.3452282	5.1090064	7
GAGAA	23640	2.2563758	5.7297573	2
TCCAG	26230	2.2181237	6.651895	7
GAAGA	22490	2.1466112	5.137024	2
CAGGA	25730	2.1186488	5.4164786	1
GGAAG	25155	2.0206802	5.413432	1
CAGAA	19940	1.9509	5.355729	1
GAAGC	22690	1.8683306	5.132398	4
TCTGC	21115	1.7889608	5.4758034	7
AAAAT	13145	1.7747123	6.8005385	3
TTTAT	12450	1.690455	5.964849	2
GAAAA	14010	1.5888857	5.2952	1
TTATT	11345	1.5404186	5.8711605	3
TTGAG	13905	1.3322308	5.002259	7
ATCTG	13395	1.3155192	5.4438143	6
ATCCA	13070	1.3132689	5.1767583	6
AATCT	10085	1.1768495	5.7705245	5
>>END_MODULE
