edu.mayo.bsi.ngsportal.shared
Class ReportData

java.lang.Object
  edu.mayo.bsi.ngsportal.shared.ReportData

All Implemented Interfaces:

com.google.gwt.user.client.rpc.IsSerializable, Comparable<ReportData>

public class ReportData
extends Object
implements com.google.gwt.user.client.rpc.IsSerializable, Comparable<ReportData>

Class that holds all the information needed for the report to Bruce

@author Gregory Dougherty

Constructor Summary

ReportData(String runName, String readType, String appType, String sampleType, String study, Date startDate, Date endDate, long numRead, int outputGB, int gbQ30, double percentPassFilter, double percentAligned, double phiXSpikeInErrorRate, double percentQ30)
Normal constructor

Method Summary

int	compareTo(ReportData other)
String	getAppType()
Date	getEndDate()
int	getGbQ30()
long	getNumRead()
int	getOutputGB()
double	getPercentAligned()
double	getPercentPassFilter()
double	getPercentQ30()
double	getPhiXSpikeInErrorRate()
String	getRunName()
String	getRunType()
String	getSampleType()
Date	getStartDate()
String	getStudy()
static void	printCollection(Collection<ReportData> theReport, PrintStream out) Print out a Collection of ReportData to a PrintStream
String	toString()

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

ReportData

public ReportData(String runName,
                  String readType,
                  String appType,
                  String sampleType,
                  String study,
                  Date startDate,
                  Date endDate,
                  long numRead,
                  int outputGB,
                  int gbQ30,
                  double percentPassFilter,
                  double percentAligned,
                  double phiXSpikeInErrorRate,
                  double percentQ30)

Normal constructor

Parameters:

runName -

readType -

appType -

sampleType -

study -

startDate -

endDate -

numRead -

outputGB -

gbQ30 -

percentPassFilter -

percentAligned -

phiXSpikeInErrorRate -

percentQ30 -

Method Detail

printCollection

public static void printCollection(Collection<ReportData> theReport,
                                   PrintStream out)

Print out a Collection of ReportData to a PrintStream

Parameters:

theReport - Data to print out

out - Where to write the data

getRunName

public final String getRunName()

Returns:

the runName

getRunType

public final String getRunType()

Returns:

the runType

getAppType

public final String getAppType()

Returns:

the appType

getSampleType

public final String getSampleType()

Returns:

the sampleType

getStudy

public final String getStudy()

Returns:

the study

getStartDate

public final Date getStartDate()

Returns:

the startDate

getEndDate

public final Date getEndDate()

Returns:

the endDate

getNumRead

public final long getNumRead()

Returns:

the numRead

getOutputGB

public final int getOutputGB()

Returns:

the outputGB

getGbQ30

public final int getGbQ30()

Returns:

the gbQ30

getPercentPassFilter

public final double getPercentPassFilter()

Returns:

the percentPassFilter

getPercentAligned

public final double getPercentAligned()

Returns:

the percentAligned

getPhiXSpikeInErrorRate

public final double getPhiXSpikeInErrorRate()

Returns:

the phiXSpikeInErrorRate

getPercentQ30

public final double getPercentQ30()

Returns:

the percentQ30

toString

public String toString()

Overrides:

toString in class Object

compareTo

public int compareTo(ReportData other)

Specified by:

compareTo in interface Comparable<ReportData>