edu.mayo.bsi.ngsportal
Class GetRunSequences

java.lang.Object
  edu.mayo.bsi.ngsportal.GetRunSequences

All Implemented Interfaces:

Usage

public class GetRunSequences
extends Object
implements Usage

Get a count of all the samples for a run from the database and print the results in the following order:
Run Name Num Sequences
If the run does not exist in the DB, return it with 0 sequences

@author Gregory Dougherty

Constructor Summary

GetRunSequences()

Method Summary

static void	main(String[] args) Parse the arguments in order to get all the samples for a run from the database and print the results in the following order Run Name Flow Cell Instrument RLIMS BatchID Start Date Primary Analysis Status Instrument Complete Date Primary Complete Date Primary QC Complete Date Primary Delivery Date
String	name() Return the name of the application
String	usage() Writes Usage information to a String

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

GetRunSequences

public GetRunSequences()

Method Detail

main

public static final void main(String[] args)

Parse the arguments in order to get all the samples for a run from the database and print the results in the following order Run Name Flow Cell Instrument RLIMS BatchID Start Date Primary Analysis Status Instrument Complete Date Primary Complete Date Primary QC Complete Date Primary Delivery Date

Parameters:

args - Arguments to parse. Specified by usage()

usage

public String usage()

Writes Usage information to a String

Specified by:

usage in interface Usage

Returns:

How to use this app

See Also:

Usage.usage()

name

public String name()

Return the name of the application

Specified by:

name in interface Usage

Returns:

Name of the application

See Also:

Usage.name()