File to place possible command line arguments for the Portal Tester


-u m082166 -p "" 
-c addSampleAnalysis Exome 3.2 Alignment "" "101015_SN316_0093_A80420ABXX" "80420ABXX" "" 3 5 "" false false
-c addSampleAnalysis Exome 3.2 Results "3-10-12" "101015_SN316_0093_A80420ABXX" "80420ABXX" "" 3 5 "" true false
-c addSampleAnalysis Exome 3.2 Results "01-10-12" "101026_SN316_0095_B806K4ABXX" "806K4ABXX" "" 3 5 "" true true
-c getSecondaryAnalysisResults ""
-c getSecondaryAnalysisResults "12-06-11"
-c addGroup TheTeam "A fun test group"
-c updateGroup 1  "The Team" "An even more fun test group"
-c addUsersToGroup 1 DuffP 10 m082166 11 Hossa 12 ""
-c removeUsersFromGroup 1 Tom ""
-c removeUsersFromGroup 1 duffp ""
-c removeUsersFromGroup 1 M082166 HoSSa ""
-c addUsersToGroup 1 DuffP 12 m082166 11 Hossa 10 ""
-c getGroups
-c deleteGroup 1
-c getGroups
-c getQCResults "Lu-1271-A" "111004_SN616_0134_AD07DWACXX" 
-c getQCResults "" "111004_SN616_0134_AD07DWACXX" 
-c getQCResults "537-3d-SO-L5" "100819_R0174436_0090" 
-c getSampleNames "" "110708_SN414_0110_AD067MACXX" 
-c addProject "My new project" "A fun test Project" "" "" "" 
-c grantProjectAccess "My new project" 110708_SN414_0110_AD067MACXX "" 
-c grantProjectAccess "My new project" 110728_SN616_0118_AD0710ACXX "" 
-c revokeProjectAccess "My new project" 110728_SN616_0118_AD0710ACXX "" 
-c removeUsersFromProject amo11 "" "My new project" 
-c addUsersToProject amo11 true "" 0 "My new project" 
-c grantUserAccess amo11 true "" 0 110728_SN616_0118_AD0710ACXX "" 
-c revokeUserAccess amo11 "" 110728_SN616_0118_AD0710ACXX "" 
-c getSamples "" "110708_SN414_0110_AD067MACXX" "" 
-c retainSample 12-06-11 "" 110708_SN414_0110_AD067MACXX "" "" "" True 
-c retainSample 12-06-11 "" 110708_SN414_0110_AD067MACXX "" "" "" False 
-c getRetainedSamples "" "" "" true 
-c getRunData "Poland, Gregory" "110708_SN414_0110_AD067MACXX" 
-c getMatchingRuns "Poland, Gregory"
