Basic Statistics
Measure | Value |
---|---|
Filename | GSM798425_MCF7_3_IP_chr17.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1181015 |
Filtered Sequences | 0 |
Sequence length | 36 |
%GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTGGG | 92445 | 3.4800267 | 4.400965 | 1 |
CCCAG | 91900 | 3.3328736 | 3.696147 | 26 |
CCAGG | 88340 | 3.2463725 | 3.7572203 | 23 |
CCTGG | 87350 | 3.2450728 | 3.9802797 | 1 |
TTTTT | 182175 | 3.2163825 | 3.948966 | 30 |
AAAAA | 180020 | 3.0102103 | 3.7518039 | 1 |