FastQC Report![[OK]](Icons/tick.png)
Basic Statistics
| Measure | Value |
|---|---|
| Filename | GSM798440_MCF7_Input_chr17.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 909306 |
| Filtered Sequences | 0 |
| Sequence length | 36 |
| %GC | 47 |
Per base sequence quality
Per sequence quality scores
![[WARN]](Icons/warning.png)
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
| Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TTTTT | 121695 | 3.3970401 | 5.0459228 | 31 |
| CTGGG | 80815 | 3.3871646 | 4.8662844 | 1 |
| CCCAG | 82210 | 3.3462403 | 3.73719 | 22 |
| AAAAA | 121255 | 3.2718613 | 4.5427246 | 1 |
| CCAGG | 77805 | 3.2027473 | 4.135461 | 1 |
| CCTGG | 74235 | 3.0765953 | 3.9564354 | 1 |