#### PharmGKB User Catalog
## By: Raymond Moore
## Date: 7/3/13


*** dosingByGene.tsv.gz ***
description: This catalog is the compliation of public data, the gene drug relationships within dosage guidelines.
raw data: /data5/bsi/refdata-new/pharmgkb/human/downloaded/2013_05_06/2013_05_07/
program: bior_genePharmGKD.rb
cmdlines: 
  > ruby bior_genePharmGKD.rb -p /data5/bsi/refdata-new/pharmgkb/human/downloaded/2013_05_06/2013_05_07/ > pharmgkb/dosingByGene.tsv
  > cd pharmgkb/
  > /projects/bsi/bictools/apps/alignment/tabix/0.2.5/bgzip dosingByGene.tsv
  > /projects/bsi/bictools/apps/alignment/tabix/0.2.5/tabix  -s 1 -b 2 -e 3 dosingByGene.tsv.gz
  > bior_index -d dosingByGene.tsv.gz -p Gene


*** genes.pharmgkb.tsv.gz ***
description: Webcrawled verions of PharmGKB gene pages.
raw data: http://www.pharmgkb.org/page/cpicGeneDrugPairs
program: webby_cpicUpdated3_20.pl table2Bior_csv.pl table2Bior_tabbedSeries.pl




*** variants.pharmgkb.tsv.gz ***
description: Webcrawled verions of PharmGKB variants pages.
raw data: http://www.pharmgkb.org/page/cpicGeneDrugPairs
program: webby_cpicUpdated3_20.pl table2Bior_csv.pl table2Bior_tabbedSeries.pl
