GenomeSmasher SNP_mutator Description
SNP_mutator_v2.pl is a perl script that will generate a vcf file of positions of single nucleotide variations, as well as small insertions and deletions that can be used as input for GenomeSmasher.
Usage
usage: SNP_mutator.pl -f
- -o Output File. Default = snp_mutator_output.vcf
- -m Total number of Desired point Mutations
- -i Total number of Desired Insertions
- -d Total number of Desired Deletions
Special Notes
If the nucleotide in the reference is “N”, that position will be skipped and no mutation will not be made
Page last modified: October 24, 2014